Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | CCZ14_21985 | Not Available | Negative | 4280741 - 4281289 | 20946.5 |
| transposase | CCZ14_21990 | Not Available | Positive | 4281288 - 4281617 | 12946.6 |
| sira-like protein | CCZ14_22000 | Not Available | Negative | 4282105 - 4282338 | 8639.5 |
| hypothetical protein | CCZ14_22005 | Not Available | Negative | 4282335 - 4283540 | 44431.5 |
| hypothetical protein | CCZ14_22015 | Not Available | Positive | 4283727 - 4284140 | 15032.2 |
| alpha-amylase | CCZ14_22020 | Not Available | Negative | 4284174 - 4285661 | 56589.2 |
| flagellar protein flit | CCZ14_22025 | Not Available | Negative | 4285739 - 4286104 | 13776.6 |
| flagellar export chaperone flis | CCZ14_22030 | Not Available | Negative | 4286104 - 4286514 | 15020.1 |
| flagellar filament capping protein flid | CCZ14_22035 | Not Available | Negative | 4286530 - 4287945 | 48831.2 |
| flagellin flic | CCZ14_22040 | Not Available | Positive | 4288193 - 4289242 | 36292.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





