Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombinase | CCZ14_20330 | Not Available | Negative | 3947251 - 3947814 | 21803.6 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | CCZ14_20345 | Not Available | Negative | 3948687 - 3949259 | 21146.2 |
| methionine import atp-binding protein metn | CCZ14_20350 | Not Available | Positive | 3949447 - 3950478 | 37804.7 |
| methionine abc transporter | CCZ14_20355 | Not Available | Positive | 3950471 - 3951124 | 23271.7 |
| methionine abc transporter substrate-binding protein metq | CCZ14_20360 | Not Available | Positive | 3951164 - 3951979 | 29433.3 |
| rcs stress response system protein rcsf | CCZ14_20365 | Not Available | Positive | 3952097 - 3952501 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CCZ14_20370 | Not Available | Positive | 3952498 - 3953205 | 26379.8 |
| proline--trna ligase | CCZ14_20375 | Not Available | Positive | 3953316 - 3955034 | 63622.3 |
| hypothetical protein | CCZ14_20380 | Not Available | Positive | 3955087 - 3955911 | 29989.0 |
| copper homeostasis/adhesion lipoprotein nlpe | CCZ14_20385 | Not Available | Negative | 3956067 - 3956777 | 25820.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





