Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | CCZ14_19940 | Not Available | Negative | 3872553 - 3873119 | 20592.4 |
| ef-p beta-lysylation protein epmb | CCZ14_19945 | Not Available | Positive | 3873161 - 3874189 | 38700.8 |
| hypothetical protein | CCZ14_19950 | Not Available | Positive | 3874424 - 3875293 | 32926.8 |
| hypothetical protein | CCZ14_19955 | Not Available | Negative | 3875343 - 3875696 | 11959.2 |
| molecular chaperone groel | CCZ14_19960 | Not Available | Negative | 3875834 - 3877480 | 57332.4 |
| co-chaperone groes | CCZ14_19965 | Not Available | Negative | 3877524 - 3877817 | 10387.6 |
| l-methionine/branched-chain amino acid transporter | CCZ14_19970 | Not Available | Positive | 3878093 - 3879349 | 44814.2 |
| membrane protein fxsa | CCZ14_19975 | Not Available | Negative | 3879365 - 3879841 | 17679.1 |
| aspartate ammonia-lyase | CCZ14_19980 | Not Available | Positive | 3880178 - 3881614 | 52359.2 |
| anaerobic c4-dicarboxylate transporter dcua | CCZ14_19985 | Not Available | Positive | 3881732 - 3883033 | 45753.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





