Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflc | CCZ14_19790 | Not Available | Negative | 3844783 - 3845787 | 37652.0 |
| protease modulator hflk | CCZ14_19795 | Not Available | Negative | 3845790 - 3847049 | 45548.5 |
| gtpase hflx | CCZ14_19800 | Not Available | Negative | 3847135 - 3848415 | 48315.0 |
| rna-binding protein hfq | CCZ14_19805 | Not Available | Negative | 3848491 - 3848799 | 11167.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CCZ14_19810 | Not Available | Negative | 3848885 - 3849835 | 35066.2 |
| dna mismatch repair protein mutl | CCZ14_19815 | Not Available | Negative | 3849828 - 3851675 | 67953.7 |
| n-acetylmuramoyl-l-alanine amidase amib | CCZ14_19820 | Not Available | Negative | 3851685 - 3853016 | 47686.6 |
| trna (n6-adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase tsae | CCZ14_19825 | Not Available | Negative | 3853035 - 3853496 | 16854.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | CCZ14_19830 | Not Available | Negative | 3853468 - 3855015 | 54701.6 |
| trna epoxyqueuosine(34) reductase queg | CCZ14_19835 | Not Available | Positive | 3855014 - 3856153 | 43105.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





