Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CCZ14_19635 | Not Available | Positive | 3820616 - 3820960 | 13011.0 |
| d-alanine--d-alanine ligase a | CCZ14_19640 | Not Available | Negative | 3820984 - 3822078 | 39347.1 |
| 50s ribosomal protein l9 | CCZ14_19645 | Not Available | Negative | 3822620 - 3823069 | 15770.0 |
| 30s ribosomal protein s18 | CCZ14_19650 | Not Available | Negative | 3823111 - 3823338 | 8986.94 |
| primosomal replication protein n | CCZ14_19655 | Not Available | Negative | 3823343 - 3823657 | 11472.9 |
| 30s ribosomal protein s6 | CCZ14_19660 | Not Available | Negative | 3823664 - 3824059 | 15187.9 |
| hypothetical protein | CCZ14_19665 | Not Available | Positive | 3824387 - 3824662 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase | CCZ14_19670 | Not Available | Negative | 3824791 - 3825477 | 25368.2 |
| xylulose 5-phosphate 3-epimerase | CCZ14_19675 | Not Available | Negative | 3825477 - 3826331 | 32094.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | CCZ14_19680 | Not Available | Negative | 3826341 - 3826991 | 23579.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





