Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | CCZ14_18925 | Not Available | Positive | 3677141 - 3678475 | 49901.0 |
| lysr family transcriptional regulator | CCZ14_18930 | Not Available | Negative | 3678508 - 3679389 | 33353.5 |
| cysteine/o-acetylserine efflux protein | CCZ14_18935 | Not Available | Positive | 3679492 - 3680079 | 21249.5 |
| autonomous glycyl radical cofactor grca | CCZ14_18940 | Not Available | Negative | 3680135 - 3680518 | 14269.0 |
| uracil-dna glycosylase | CCZ14_18945 | Not Available | Positive | 3680823 - 3681512 | 25682.6 |
| trna/rrna methyltransferase | CCZ14_18950 | Not Available | Negative | 3681560 - 3682597 | 37826.5 |
| hypothetical protein | CCZ14_18955 | Not Available | Negative | 3682587 - 3682790 | 7710.17 |
| thiol disulfide reductase thioredoxin | CCZ14_18960 | Not Available | Positive | 3682804 - 3683223 | 15555.6 |
| dtw domain-containing protein | CCZ14_18965 | Not Available | Positive | 3683292 - 3683990 | 26134.5 |
| protein acetyltransferase | CCZ14_18970 | Not Available | Positive | 3684022 - 3686682 | 97892.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





