Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease 3 | CCZ14_18875 | Not Available | Negative | 3667628 - 3668308 | 25551.6 |
| hypothetical protein | CCZ14_18880 | Not Available | Positive | 3668252 - 3668530 | 10182.4 |
| s26 family signal peptidase | CCZ14_18885 | Not Available | Negative | 3668580 - 3669554 | 35948.3 |
| elongation factor 4 | CCZ14_18890 | Not Available | Negative | 3669570 - 3671369 | 66602.2 |
| soxr reducing system protein rsec | CCZ14_18895 | Not Available | Negative | 3671567 - 3672046 | 16641.3 |
| sigma-e factor regulatory protein rseb | CCZ14_18900 | Not Available | Negative | 3672043 - 3672999 | 35777.9 |
| anti-sigma-e factor rsea | CCZ14_18905 | Not Available | Negative | 3672999 - 3673649 | 24322.8 |
| ecf rna polymerase sigma-e factor | CCZ14_18910 | Not Available | Negative | 3673682 - 3674257 | 21697.0 |
| l-aspartate oxidase | CCZ14_18915 | Not Available | Positive | 3674665 - 3676287 | 60195.7 |
| trna (adenosine(37)-n6)-methyltransferase trmm | CCZ14_18920 | Not Available | Negative | 3676272 - 3677009 | 27274.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





