Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine aminotransferase | CCZ14_18465 | Not Available | Negative | 3587040 - 3588419 | 49634.2 |
| hypothetical protein | CCZ14_18470 | Not Available | Negative | 3588355 - 3588561 | 7711.06 |
| hypothetical protein | CCZ14_18475 | Not Available | Positive | 3588837 - 3590357 | 55039.9 |
| padr family transcriptional regulator | CCZ14_18480 | Not Available | Negative | 3590464 - 3591087 | 23363.7 |
| siderophore-interacting protein | CCZ14_18490 | Not Available | Positive | 3591375 - 3592139 | 28893.1 |
| Trna-met | Not Available | Not Available | Positive | 3592193 - 3592268 | Not Available |
| mismatch-specific dna-glycosylase | CCZ14_18500 | Not Available | Positive | 3592393 - 3592899 | 18674.5 |
| rna polymerase sigma factor rpod | CCZ14_18505 | Not Available | Negative | 3592977 - 3594818 | 70239.3 |
| rna polymerase subunit sigma | CCZ14_18510 | Not Available | Negative | 3594877 - 3594999 | 4564.46 |
| dna primase | CCZ14_18515 | Not Available | Negative | 3595013 - 3596758 | 65598.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





