Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose operon repressor | CCZ14_17485 | Not Available | Negative | 3376634 - 3377581 | 34575.8 |
| magnesium-translocating p-type atpase | CCZ14_17490 | Not Available | Positive | 3377960 - 3380656 | 99444.2 |
| reactive intermediate/imine deaminase | CCZ14_17495 | Not Available | Negative | 3380862 - 3381248 | 13612.3 |
| aspartate carbamoyltransferase regulatory subunit | CCZ14_17500 | Not Available | Negative | 3381321 - 3381782 | 17121.6 |
| aspartate carbamoyltransferase catalytic subunit | CCZ14_17505 | Not Available | Negative | 3381795 - 3382730 | 34429.3 |
| pyrbi operon leader peptide | CCZ14_17510 | Not Available | Negative | 3382734 - 3382868 | 5098.43 |
| hypothetical protein | CCZ14_17515 | Not Available | Positive | 3382998 - 3383180 | 6888.34 |
| rida family protein | CCZ14_17520 | Not Available | Negative | 3383149 - 3383544 | 14590.1 |
| oxidoreductase | CCZ14_17525 | Not Available | Negative | 3383675 - 3384388 | 24629.6 |
| tetr family transcriptional regulator | CCZ14_17530 | Not Available | Positive | 3384459 - 3385052 | 21372.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





