Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | CCZ14_17135 | Not Available | Negative | 3306152 - 3306943 | 27865.7 |
| n-acetylmuramic acid 6-phosphate etherase | CCZ14_17140 | Not Available | Positive | 3307223 - 3308119 | 31062.7 |
| pts n-acetylmuramic acid transporter subunits iibc | CCZ14_17145 | Not Available | Positive | 3308123 - 3309547 | 49829.1 |
| deferrochelatase/peroxidase | CCZ14_17150 | Not Available | Negative | 3309725 - 3310624 | 33086.2 |
| rpoe-regulated lipoprotein | CCZ14_17155 | Not Available | Negative | 3310720 - 3311295 | 20858.7 |
| hypothetical protein | CCZ14_17160 | Not Available | Negative | 3311356 - 3311805 | 17152.3 |
| gnat family acetyltransferase | CCZ14_17165 | Not Available | Negative | 3311792 - 3312217 | 16257.5 |
| n-acetylmuramoyl-l-alanine amidase | CCZ14_17170 | Not Available | Positive | 3312431 - 3313300 | 31467.9 |
| coproporphyrinogen iii oxidase | CCZ14_17175 | Not Available | Positive | 3313304 - 3314203 | 34304.4 |
| arac family transcriptional regulator | CCZ14_17180 | Not Available | Negative | 3314209 - 3315261 | 40106.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





