Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 3281722 - 3281797 | Not Available |
| hypothetical protein | CCZ14_16990 | Not Available | Positive | 3282033 - 3282377 | 12720.4 |
| hypothetical protein | CCZ14_16995 | Not Available | Positive | 3282379 - 3282771 | 14874.9 |
| glutamate--trna ligase | CCZ14_17000 | Not Available | Negative | 3282822 - 3284237 | 53804.7 |
| Trna-val | Not Available | Not Available | Positive | 3284496 - 3284571 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3284616 - 3284691 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3284738 - 3284813 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3284818 - 3284893 | Not Available |
| lysr family transcriptional regulator | CCZ14_17025 | Not Available | Negative | 3285004 - 3285888 | 33582.3 |
| xapx domain-containing protein | CCZ14_17030 | Not Available | Negative | 3285929 - 3286087 | 5691.39 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





