Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | CCZ14_16735 | Not Available | Positive | 3222902 - 3223615 | 26337.2 |
| hypothetical protein | CCZ14_16740 | Not Available | Positive | 3223647 - 3224420 | 28687.8 |
| hypothetical protein | CCZ14_16745 | Not Available | Positive | 3224466 - 3225815 | 48692.1 |
| hypothetical protein | CCZ14_16750 | Not Available | Positive | 3225815 - 3226639 | 31968.6 |
| ytfj family protein | CCZ14_16755 | Not Available | Positive | 3226648 - 3227211 | 20907.3 |
| lps export abc transporter permease lptf | CCZ14_16760 | Not Available | Positive | 3227242 - 3228312 | 39909.1 |
| lps export abc transporter permease lptg | CCZ14_16765 | Not Available | Positive | 3228309 - 3229388 | 39688.3 |
| 8-amino-7-oxononanoate synthase | CCZ14_16770 | Not Available | Negative | 3229423 - 3230595 | 41727.1 |
| phosphopantetheine attachment site family protein | CCZ14_16775 | Not Available | Negative | 3230595 - 3230843 | 9417.69 |
| short-chain dehydrogenase | CCZ14_16780 | Not Available | Negative | 3230875 - 3231789 | 33522.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





