Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | CCZ14_16585 | Not Available | Negative | 3194996 - 3195745 | 29181.9 |
| ygiq family radical sam protein | CCZ14_16590 | Not Available | Positive | 3195997 - 3198216 | 83533.5 |
| hypothetical protein | CCZ14_16595 | Not Available | Negative | 3198258 - 3198515 | 9527.61 |
| hypothetical protein | CCZ14_16600 | Not Available | Negative | 3198566 - 3199492 | 34998.0 |
| 2,5-didehydrogluconate reductase a | CCZ14_16605 | Not Available | Negative | 3199692 - 3200519 | 31138.5 |
| nadh-dependent alcohol dehydrogenase | CCZ14_16610 | Not Available | Negative | 3200624 - 3201787 | 42115.5 |
| arac family transcriptional regulator | CCZ14_16615 | Not Available | Positive | 3201924 - 3202880 | 36059.0 |
| deda family protein | CCZ14_16620 | Not Available | Negative | 3202920 - 3203579 | 24135.3 |
| cystathionine beta-lyase | CCZ14_16625 | Not Available | Negative | 3203719 - 3204906 | 43200.8 |
| hypothetical protein | CCZ14_16630 | Not Available | Positive | 3205010 - 3205165 | 5991.37 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





