Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | CCZ14_16285 | Not Available | Negative | 3134594 - 3135256 | 25098.2 |
| multidrug abc transporter atp-binding protein | CCZ14_16290 | Not Available | Positive | 3135365 - 3136291 | 34679.2 |
| inner membrane transport permease yadh | CCZ14_16295 | Not Available | Positive | 3136288 - 3137058 | 28517.9 |
| pts sugar transporter subunit iia | CCZ14_16300 | Not Available | Positive | 3137163 - 3137603 | 16513.0 |
| polysaccharide deacetylase family protein | CCZ14_16305 | Not Available | Positive | 3137667 - 3138896 | 46336.0 |
| aspartate 1-decarboxylase | CCZ14_16310 | Not Available | Negative | 3138900 - 3139280 | 13834.5 |
| hypothetical protein | CCZ14_16315 | Not Available | Positive | 3139230 - 3139433 | 7675.38 |
| isncy family transposase | CCZ14_16320 | Not Available | Positive | 3139554 - 3140474 | 35601.9 |
| transposase | CCZ14_16325 | Not Available | Positive | 3140543 - 3140740 | 7626.38 |
| pantoate--beta-alanine ligase | CCZ14_16330 | Not Available | Negative | 3140822 - 3141673 | 31596.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





