Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase inhibitor yacg | CCZ14_16130 | Not Available | Negative | 3101391 - 3101588 | 7306.49 |
| cell division protein zapd | CCZ14_16135 | Not Available | Negative | 3101598 - 3102341 | 28279.3 |
| dephospho-coa kinase | CCZ14_16140 | Not Available | Negative | 3102341 - 3102961 | 22623.0 |
| guanosine monophosphate reductase | CCZ14_16145 | Not Available | Positive | 3103186 - 3104229 | 37454.9 |
| type iv pilin biogenesis protein | CCZ14_16150 | Not Available | Negative | 3104264 - 3105466 | 44274.0 |
| type ii secretion system protein gspe | CCZ14_16155 | Not Available | Negative | 3105702 - 3106841 | 41494.3 |
| prepilin peptidase-dependent pilin | CCZ14_16160 | Not Available | Negative | 3106851 - 3107291 | 15621.7 |
| nicotinate-nucleotide diphosphorylase | CCZ14_16170 | Not Available | Negative | 3107495 - 3108388 | 32774.0 |
| n-acetylmuramoyl-l-alanine amidase | CCZ14_16175 | Not Available | Positive | 3108476 - 3109027 | 20520.1 |
| beta-lactamase regulator ampe | CCZ14_16180 | Not Available | Positive | 3109024 - 3109878 | 32122.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





