Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine:gamma-butyrobetaine antiporter | CCZ14_15410 | Not Available | Negative | 2936230 - 2937744 | 56624.4 |
| protein fixa | CCZ14_15415 | Not Available | Positive | 2938217 - 2938987 | 27173.3 |
| nitrogen fixation protein fixb | CCZ14_15420 | Not Available | Positive | 2939002 - 2939943 | 33458.0 |
| fad-dependent oxidoreductase | CCZ14_15425 | Not Available | Positive | 2939994 - 2941280 | 45732.6 |
| ferredoxin-like protein fixx | CCZ14_15430 | Not Available | Positive | 2941277 - 2941564 | 10507.5 |
| mfs transporter | CCZ14_15435 | Not Available | Positive | 2941623 - 2942954 | 48713.9 |
| glutathione-regulated potassium-efflux system ancillary protein keff | CCZ14_15440 | Not Available | Positive | 2943062 - 2943592 | 20171.1 |
| glutathione-regulated potassium-efflux system protein kefc | CCZ14_15445 | Not Available | Positive | 2943585 - 2945447 | 67821.2 |
| dihydrofolate reductase | CCZ14_15450 | Not Available | Positive | 2945639 - 2946118 | 18000.3 |
| antitoxin | CCZ14_15455 | Not Available | Positive | 2946204 - 2946437 | 8530.97 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





