Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis protein ubij | CCZ14_14455 | Not Available | Positive | 2775499 - 2776104 | 22105.8 |
| ubiquinone biosynthesis protein ubib | CCZ14_14460 | Not Available | Positive | 2776101 - 2777741 | 63220.3 |
| twin-arginine translocase subunit tata | CCZ14_14465 | Not Available | Positive | 2777820 - 2778089 | 9664.5 |
| twin-arginine translocase subunit tatb | CCZ14_14470 | Not Available | Positive | 2778093 - 2778608 | 18479.9 |
| twin-arginine translocase subunit tatc | CCZ14_14475 | Not Available | Positive | 2778611 - 2779387 | 28893.9 |
| hydrolase tatd | CCZ14_14480 | Not Available | Positive | 2779429 - 2780211 | 28978.6 |
| transcription/translation regulatory transformer protein rfah | CCZ14_14485 | Not Available | Negative | 2780208 - 2780696 | 18415.3 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | CCZ14_14490 | Not Available | Positive | 2780863 - 2782356 | 55606.8 |
| nad(p)h-flavin reductase | CCZ14_14495 | Not Available | Positive | 2782402 - 2783103 | 26243.5 |
| acetyl-coa c-acyltransferase fada | CCZ14_14500 | Not Available | Negative | 2783284 - 2784447 | 40825.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





