Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | CCZ14_14405 | Not Available | Negative | 2765682 - 2766491 | 29326.6 |
| uridine phosphorylase | CCZ14_14410 | Not Available | Positive | 2766753 - 2767517 | 27288.8 |
| c4-dicarboxylate abc transporter permease | CCZ14_14415 | Not Available | Negative | 2767552 - 2769042 | 51791.2 |
| tripartite tricarboxylate transporter tctb family protein | CCZ14_14420 | Not Available | Negative | 2769055 - 2769561 | 18051.8 |
| tripartite tricarboxylate transporter substrate binding protein | CCZ14_14425 | Not Available | Negative | 2769578 - 2770552 | 34173.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | CCZ14_14430 | Not Available | Negative | 2770577 - 2771206 | 22292.3 |
| carbohydrate kinase | CCZ14_14435 | Not Available | Negative | 2771196 - 2772200 | 36412.6 |
| iclr family transcriptional regulator | CCZ14_14440 | Not Available | Negative | 2772224 - 2772991 | 28298.0 |
| dna recombination protein rmuc | CCZ14_14445 | Not Available | Positive | 2773208 - 2774635 | 54783.7 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | CCZ14_14450 | Not Available | Positive | 2774730 - 2775485 | 28104.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





