Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | CCZ14_14355 | Not Available | Positive | 2754157 - 2756154 | 72992.7 |
| murr/rpir family transcriptional regulator | CCZ14_14360 | Not Available | Negative | 2756184 - 2757029 | 31503.9 |
| lysr family transcriptional regulator | CCZ14_14365 | Not Available | Negative | 2757229 - 2758134 | 33914.1 |
| cytosine permease | CCZ14_14370 | Not Available | Negative | 2758212 - 2759435 | 42554.3 |
| glutamyl-trna amidotransferase | CCZ14_14375 | Not Available | Negative | 2759461 - 2759850 | 14311.2 |
| carbamate kinase | CCZ14_14380 | Not Available | Negative | 2759867 - 2760823 | 34009.8 |
| hypothetical protein | CCZ14_14385 | Not Available | Negative | 2760816 - 2762240 | 50038.4 |
| hypothetical protein | CCZ14_14390 | Not Available | Negative | 2762237 - 2763796 | 54991.0 |
| hypothetical protein | CCZ14_14395 | Not Available | Negative | 2763891 - 2764751 | 31925.3 |
| cysteine hydrolase | CCZ14_14400 | Not Available | Negative | 2764757 - 2765425 | 24079.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





