Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein phoq | CCZ14_13845 | Not Available | Negative | 2660026 - 2661486 | 55302.8 |
| two-component system response regulator phop | CCZ14_13850 | Not Available | Negative | 2661486 - 2662157 | 25536.7 |
| adenylosuccinate lyase | CCZ14_13855 | Not Available | Negative | 2662326 - 2663696 | 51526.6 |
| lysogenization protein hfld | CCZ14_13860 | Not Available | Negative | 2663700 - 2664341 | 22935.0 |
| trna 2-thiouridine(34) synthase mnma | CCZ14_13865 | Not Available | Negative | 2664377 - 2665483 | 40961.7 |
| inverse autotransporter beta-barrel domain-containing protein | CCZ14_13975 | Not Available | Positive | 2677448 - 2681356 | 138237.0 |
| Trna-asp | Not Available | Not Available | Positive | 2681775 - 2681851 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 2681860 - 2681935 | Not Available |
| transcriptional regulator | CCZ14_13995 | Not Available | Negative | 2682031 - 2682870 | 31792.1 |
| hypothetical protein | CCZ14_14000 | Not Available | Positive | 2682989 - 2683327 | 13134.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





