Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacylase | CCZ14_13795 | Not Available | Positive | 2651230 - 2652051 | 30968.2 |
| hypothetical protein | CCZ14_13800 | Not Available | Negative | 2652189 - 2652977 | 28812.4 |
| duf3592 domain-containing protein | CCZ14_13805 | Not Available | Negative | 2652974 - 2653435 | 17464.0 |
| spermidine/putrescine-binding periplasmic protein | CCZ14_13810 | Not Available | Negative | 2653493 - 2654539 | 38855.0 |
| spermidine/putrescine abc transporter permease | CCZ14_13815 | Not Available | Negative | 2654536 - 2655330 | 29112.7 |
| spermidine/putrescine abc transporter permease potb | CCZ14_13820 | Not Available | Negative | 2655327 - 2656184 | 32224.3 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | CCZ14_13825 | Not Available | Negative | 2656168 - 2657304 | 43030.8 |
| hypothetical protein | CCZ14_13830 | Not Available | Negative | 2657283 - 2657534 | 9833.07 |
| peptidase t | CCZ14_13835 | Not Available | Positive | 2657554 - 2658780 | 44912.0 |
| 50s ribosomal protein l16 arginine hydroxylase | CCZ14_13840 | Not Available | Negative | 2658829 - 2659950 | 42567.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





