Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | CCZ14_13060 | Not Available | Positive | 2520076 - 2521335 | 47275.2 |
| rhamnulose-1-phosphate aldolase | CCZ14_13065 | Not Available | Positive | 2521602 - 2522426 | 30147.2 |
| l-rhamnose mutarotase | CCZ14_13070 | Not Available | Positive | 2522436 - 2522750 | 12223.4 |
| porin | CCZ14_13075 | Not Available | Negative | 2522791 - 2524185 | 52042.4 |
| sulfurtransferase fdhd | CCZ14_13085 | Not Available | Negative | 2525181 - 2526014 | 30533.8 |
| hypothetical protein | CCZ14_13090 | Not Available | Negative | 2525950 - 2526204 | 9595.78 |
| sulfate abc transporter substrate-binding protein | CCZ14_13095 | Not Available | Positive | 2526208 - 2526795 | 21369.5 |
| formate dehydrogenase-n subunit alpha | CCZ14_13100 | Not Available | Positive | 2526844 - 2529258 | 89602.2 |
| formate dehydrogenase subunit beta | CCZ14_13105 | Not Available | Positive | 2529271 - 2530173 | 33119.1 |
| formate dehydrogenase cytochrome b556(fdo) subunit | CCZ14_13110 | Not Available | Positive | 2530170 - 2530805 | 24607.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





