Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | CCZ14_12285 | Not Available | Positive | 2362927 - 2363904 | 34770.9 |
| d-arabinose 5-phosphate isomerase | CCZ14_12290 | Not Available | Positive | 2363918 - 2364904 | 35211.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdsc | CCZ14_12295 | Not Available | Positive | 2364925 - 2365491 | 20016.3 |
| lps export abc transporter periplasmic protein lptc | CCZ14_12300 | Not Available | Positive | 2365488 - 2366063 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | CCZ14_12305 | Not Available | Positive | 2366032 - 2366589 | 20128.1 |
| abc transporter atp-binding protein | CCZ14_12310 | Not Available | Positive | 2366596 - 2367321 | 26802.3 |
| rna polymerase sigma-54 factor | CCZ14_12315 | Not Available | Positive | 2367369 - 2368802 | 53996.8 |
| ribosome hibernation promoting factor | CCZ14_12320 | Not Available | Positive | 2368825 - 2369112 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | CCZ14_12325 | Not Available | Positive | 2369230 - 2369721 | 17934.6 |
| rnase adaptor protein rapz | CCZ14_12330 | Not Available | Positive | 2369767 - 2370621 | 32494.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





