Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | CCZ14_12185 | Not Available | Negative | 2345525 - 2346862 | 47519.4 |
| dihydropteroate synthase | CCZ14_12190 | Not Available | Negative | 2346855 - 2347703 | 30633.0 |
| atp-dependent zinc metalloprotease ftsh | CCZ14_12195 | Not Available | Negative | 2347793 - 2349727 | 70712.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase | CCZ14_12200 | Not Available | Negative | 2349827 - 2350456 | 23336.4 |
| rna-binding protein | CCZ14_12205 | Not Available | Positive | 2350582 - 2350875 | 10784.4 |
| transcription elongation factor grea | CCZ14_12210 | Not Available | Negative | 2351031 - 2351507 | 17642.0 |
| d-alanyl-d-alanine carboxypeptidase | CCZ14_12215 | Not Available | Positive | 2351755 - 2353188 | 51801.3 |
| gtpase obge | CCZ14_12220 | Not Available | Negative | 2353229 - 2354401 | 43230.2 |
| eama family transporter | CCZ14_12225 | Not Available | Negative | 2354417 - 2355382 | 34951.2 |
| 50s ribosomal protein l27 | CCZ14_12230 | Not Available | Negative | 2355509 - 2355766 | 9125.01 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





