Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | CCZ14_11935 | Not Available | Positive | 2299173 - 2299841 | 25288.0 |
| 50s ribosomal protein l28 | CCZ14_11940 | Not Available | Positive | 2300058 - 2300294 | 9007.02 |
| 50s ribosomal protein l33 | CCZ14_11945 | Not Available | Positive | 2300315 - 2300482 | 6371.94 |
| dna-formamidopyrimidine glycosylase | CCZ14_11950 | Not Available | Positive | 2300580 - 2301389 | 30149.7 |
| pantetheine-phosphate adenylyltransferase | CCZ14_11955 | Not Available | Negative | 2301428 - 2301907 | 17953.8 |
| 3-deoxy-d-manno-octulosonic acid transferase | CCZ14_11960 | Not Available | Negative | 2301915 - 2303192 | 47293.9 |
| lipopolysaccharide core heptosyltransferase rfaq | CCZ14_11965 | Not Available | Positive | 2303606 - 2304664 | 39475.9 |
| glucosyltransferase i rfag | CCZ14_11970 | Not Available | Positive | 2304661 - 2305785 | 42558.7 |
| lipopolysaccharide core heptose(i) kinase rfap | CCZ14_11975 | Not Available | Positive | 2305778 - 2306575 | 31137.3 |
| lipopolysaccharide biosynthesis protein | CCZ14_11980 | Not Available | Positive | 2306612 - 2307547 | 36787.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





