Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketose-bisphosphate aldolase | CCZ14_11835 | Not Available | Positive | 2278238 - 2279098 | 30815.0 |
| transcriptional regulator | CCZ14_11840 | Not Available | Positive | 2279146 - 2280078 | 32958.6 |
| d-lyxose/d-mannose family sugar isomerase | CCZ14_11845 | Not Available | Positive | 2280059 - 2280739 | 26151.1 |
| asma family protein | CCZ14_11850 | Not Available | Negative | 2280783 - 2282492 | 62237.9 |
| xanthine permease xanp | CCZ14_11855 | Not Available | Negative | 2282613 - 2284004 | 48871.2 |
| sodium/glutamate symport carrier protein | CCZ14_11860 | Not Available | Positive | 2284284 - 2285489 | 42445.9 |
| dna helicase recg | CCZ14_11865 | Not Available | Negative | 2285523 - 2287604 | 76515.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | CCZ14_11870 | Not Available | Negative | 2287610 - 2288299 | 25360.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | CCZ14_11875 | Not Available | Negative | 2288306 - 2290414 | 79360.1 |
| dna-directed rna polymerase subunit omega | CCZ14_11880 | Not Available | Negative | 2290433 - 2290708 | 10237.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





