Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan permease | CCZ14_11520 | Not Available | Negative | 2216243 - 2217490 | 45273.3 |
| tryptophanase | CCZ14_11525 | Not Available | Negative | 2217582 - 2218997 | 52775.4 |
| tryptophanase leader peptide | CCZ14_11530 | Not Available | Negative | 2219218 - 2219292 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CCZ14_11535 | Not Available | Negative | 2219534 - 2220898 | 49199.8 |
| membrane protein insertase yidc | CCZ14_11540 | Not Available | Negative | 2221004 - 2222650 | 61543.5 |
| membrane protein insertion efficiency factor yidd | CCZ14_11545 | Not Available | Negative | 2222653 - 2222910 | 9381.61 |
| ribonuclease p protein component | CCZ14_11550 | Not Available | Negative | 2222874 - 2223233 | 13790.0 |
| 50s ribosomal protein l34 | CCZ14_11555 | Not Available | Negative | 2223250 - 2223390 | 5380.74 |
| hypothetical protein | CCZ14_11560 | Not Available | Positive | 2223503 - 2223703 | 7371.77 |
| chromosomal replication initiator protein dnaa | CCZ14_11565 | Not Available | Positive | 2223997 - 2225400 | 52553.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





