Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase | CCZ14_11260 | Not Available | Positive | 2162425 - 2163333 | 32944.2 |
| dna-binding protein h-ns | CCZ14_11265 | Not Available | Negative | 2163478 - 2163891 | 15540.5 |
| thymidine kinase | CCZ14_11270 | Not Available | Positive | 2164495 - 2165112 | 23372.8 |
| gntr family transcriptional regulator | CCZ14_11285 | Not Available | Positive | 2166496 - 2167188 | 26107.5 |
| mfs transporter | CCZ14_11290 | Not Available | Positive | 2167211 - 2168638 | 51582.0 |
| ribose operon repressor | CCZ14_11295 | Not Available | Negative | 2168604 - 2169596 | 36614.1 |
| ribokinase | CCZ14_11300 | Not Available | Negative | 2169600 - 2170529 | 32282.3 |
| d-ribose abc transporter substrate-binding protein | CCZ14_11305 | Not Available | Negative | 2170655 - 2171545 | 30940.2 |
| ribose abc transporter permease | CCZ14_11310 | Not Available | Negative | 2171570 - 2172535 | 33454.0 |
| ribose import atp-binding protein rbsa | CCZ14_11315 | Not Available | Negative | 2172540 - 2174045 | 55071.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





