Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein ychf | CCZ14_11060 | Not Available | Negative | 2122867 - 2123958 | 39655.5 |
| aminoacyl-trna hydrolase | CCZ14_11065 | Not Available | Negative | 2124075 - 2124659 | 21113.6 |
| hypothetical protein | CCZ14_11070 | Not Available | Positive | 2124937 - 2125215 | 10486.9 |
| sodium-independent anion transporter | CCZ14_11075 | Not Available | Negative | 2125270 - 2126949 | 59446.9 |
| ribose-phosphate pyrophosphokinase | CCZ14_11080 | Not Available | Negative | 2127074 - 2128021 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CCZ14_11085 | Not Available | Negative | 2128172 - 2129023 | 30873.0 |
| outer membrane lipoprotein lolb | CCZ14_11090 | Not Available | Negative | 2129023 - 2129646 | 23590.1 |
| glutamyl-trna reductase | CCZ14_11095 | Not Available | Positive | 2129860 - 2131116 | 46333.5 |
| peptide chain release factor 1 | CCZ14_11100 | Not Available | Positive | 2131158 - 2132240 | 40519.6 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | CCZ14_11105 | Not Available | Positive | 2132240 - 2133073 | 30932.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





