Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CCZ14_10315 | Not Available | Positive | 2004362 - 2004595 | 8773.81 |
| pseudouridine kinase | CCZ14_10320 | Not Available | Positive | 2004779 - 2005720 | 33632.0 |
| pseudouridine-5'-phosphate glycosidase | CCZ14_10325 | Not Available | Positive | 2005708 - 2006646 | 32991.9 |
| nupc/nupg family nucleoside cnt transporter | CCZ14_10330 | Not Available | Positive | 2006740 - 2007990 | 43470.4 |
| transcriptional regulator yeil | CCZ14_10335 | Not Available | Negative | 2008057 - 2008755 | 26867.6 |
| ribonucleoside hydrolase | CCZ14_10340 | Not Available | Positive | 2008885 - 2009826 | 33731.0 |
| kinase | CCZ14_10345 | Not Available | Negative | 2010094 - 2011182 | 40115.1 |
| endonuclease | CCZ14_10350 | Not Available | Negative | 2011186 - 2012043 | 31463.2 |
| hypothetical protein | CCZ14_10355 | Not Available | Negative | 2012117 - 2013166 | 36914.4 |
| lysr family transcriptional regulator | CCZ14_10360 | Not Available | Positive | 2013265 - 2014146 | 32725.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





