Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccmf | CCZ14_10150 | Not Available | Positive | 1972151 - 1974094 | 71392.5 |
| thiol:disulfide interchange protein | CCZ14_10155 | Not Available | Positive | 1974091 - 1974648 | 20810.1 |
| cytochrome c biogenesis protein ccmh | CCZ14_10160 | Not Available | Positive | 1974645 - 1975697 | 39105.3 |
| dna-binding response regulator | CCZ14_10165 | Not Available | Negative | 1975732 - 1976379 | 23626.5 |
| hypothetical protein | CCZ14_10170 | Not Available | Positive | 1976411 - 1976668 | 9803.98 |
| autotransporter outer membrane beta-barrel domain-containing protein | CCZ14_10180 | Not Available | Positive | 1977274 - 1977651 | 13369.4 |
| Trna-pro | Not Available | Not Available | Positive | 1977753 - 1977829 | Not Available |
| hypothetical protein | CCZ14_10190 | Not Available | Negative | 1977904 - 1979664 | 67299.8 |
| hypothetical protein | CCZ14_10195 | Not Available | Negative | 1979684 - 1979911 | 8302.98 |
| nucleoid-associated protein | CCZ14_10200 | Not Available | Positive | 1980093 - 1981100 | 37825.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





