Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acids transporter | CCZ14_10000 | Not Available | Negative | 1941524 - 1942846 | 47548.7 |
| succinyl-coa--3-ketoacid-coa transferase | CCZ14_10005 | Not Available | Negative | 1942843 - 1943493 | 22975.1 |
| acetyl-coa--acetoacetyl-coa transferase subunit alpha | CCZ14_10010 | Not Available | Negative | 1943493 - 1944155 | 23536.8 |
| two-component system response regulator | CCZ14_10015 | Not Available | Negative | 1944351 - 1945736 | 52137.5 |
| two-component system sensor histidine kinase atos | CCZ14_10020 | Not Available | Negative | 1945733 - 1947559 | 67844.2 |
| hybrid sensor histidine kinase/response regulator | CCZ14_10025 | Not Available | Positive | 1947726 - 1950575 | 106597.0 |
| dna-binding response regulator | CCZ14_10030 | Not Available | Negative | 1950775 - 1951425 | 23672.0 |
| phosphotransferase rcsd | CCZ14_10035 | Not Available | Negative | 1951442 - 1954114 | 100340.0 |
| hypothetical protein | CCZ14_10040 | Not Available | Negative | 1954131 - 1954370 | 9255.44 |
| hypothetical protein | CCZ14_10045 | Not Available | Negative | 1954345 - 1954572 | 8754.88 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





