Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna utilization protein hofp | CCZ14_09595 | Not Available | Positive | 1848354 - 1848758 | 15080.0 |
| dna transporter hofq | CCZ14_09600 | Not Available | Positive | 1848670 - 1849908 | 44814.0 |
| shikimate kinase | CCZ14_09605 | Not Available | Positive | 1850309 - 1850830 | 19539.2 |
| 3-dehydroquinate synthase | CCZ14_09610 | Not Available | Positive | 1850887 - 1851975 | 38900.3 |
| cell division protein damx | CCZ14_09615 | Not Available | Positive | 1852067 - 1853353 | 46034.1 |
| dna adenine methylase | CCZ14_09620 | Not Available | Positive | 1853460 - 1854296 | 32087.2 |
| ribulose-phosphate 3-epimerase | CCZ14_09625 | Not Available | Positive | 1854314 - 1854991 | 24555.7 |
| phosphoglycolate phosphatase | CCZ14_09630 | Not Available | Positive | 1854984 - 1855742 | 27389.8 |
| tryptophan--trna ligase | CCZ14_09635 | Not Available | Positive | 1855735 - 1856739 | 37425.9 |
| hypothetical protein | CCZ14_09640 | Not Available | Positive | 1856901 - 1857806 | 33551.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





