Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | CCZ14_09325 | Not Available | Positive | 1786004 - 1786699 | 26294.9 |
| gntr family transcriptional regulator | CCZ14_09330 | Not Available | Positive | 1786792 - 1787787 | 36424.3 |
| gluconokinase | CCZ14_09335 | Not Available | Positive | 1787926 - 1788453 | 19491.3 |
| gluconate transporter | CCZ14_09340 | Not Available | Positive | 1788457 - 1789797 | 46447.0 |
| recq family atp-dependent dna helicase | CCZ14_09345 | Not Available | Positive | 1789938 - 1792034 | 77553.3 |
| dna-processing protein dpra | CCZ14_09350 | Not Available | Positive | 1792034 - 1793236 | 43848.8 |
| antibiotic transporter | CCZ14_09355 | Not Available | Negative | 1793282 - 1793875 | 21521.9 |
| aspartate-semialdehyde dehydrogenase | CCZ14_09360 | Not Available | Positive | 1794067 - 1795170 | 40033.2 |
| glycogen-branching enzyme | CCZ14_09365 | Not Available | Positive | 1795443 - 1797629 | 84367.4 |
| glycogen debranching enzyme | CCZ14_09370 | Not Available | Positive | 1797626 - 1799599 | 73728.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





