Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine abc transporter subunit substrate-binding protein livk | CCZ14_09225 | Not Available | Positive | 1768638 - 1769741 | 38980.4 |
| toxin-antitoxin system, antitoxin component | CCZ14_09230 | Not Available | Positive | 1769890 - 1770156 | 9929.96 |
| n-acetyltransferase | CCZ14_09235 | Not Available | Positive | 1770163 - 1770690 | 19674.7 |
| aspartate 1-decarboxylase autocleavage activator panm | CCZ14_09240 | Not Available | Negative | 1770687 - 1771070 | 14573.4 |
| duf4753 domain-containing protein | CCZ14_09245 | Not Available | Positive | 1771205 - 1771342 | 5384.56 |
| branched chain amino acid abc transporter substrate-binding protein | CCZ14_09250 | Not Available | Positive | 1771493 - 1772602 | 39437.0 |
| branched-chain amino acid abc transporter permease | CCZ14_09255 | Not Available | Positive | 1772650 - 1773576 | 32966.4 |
| branched-chain amino acid abc transporter permease | CCZ14_09260 | Not Available | Positive | 1773573 - 1774850 | 46272.2 |
| abc transporter atp-binding protein | CCZ14_09265 | Not Available | Positive | 1774847 - 1775614 | 28458.8 |
| abc transporter atp-binding protein | CCZ14_09270 | Not Available | Positive | 1775616 - 1776329 | 26297.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





