Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nike | CCZ14_09125 | Not Available | Negative | 1749722 - 1750528 | 29726.5 |
| nickel import atp-binding protein nikd | CCZ14_09130 | Not Available | Negative | 1750525 - 1751289 | 26814.1 |
| nickel abc transporter permease subunit nikc | CCZ14_09135 | Not Available | Negative | 1751289 - 1752122 | 30391.9 |
| nickel abc transporter permease subunit nikb | CCZ14_09140 | Not Available | Negative | 1752119 - 1753063 | 35250.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | CCZ14_09145 | Not Available | Negative | 1753063 - 1754637 | 58814.2 |
| acp synthase | CCZ14_09150 | Not Available | Negative | 1754748 - 1755335 | 21731.9 |
| permease | CCZ14_09155 | Not Available | Negative | 1755390 - 1756439 | 38539.8 |
| mfs transporter | CCZ14_09160 | Not Available | Positive | 1756571 - 1757788 | 42130.3 |
| hypothetical protein | CCZ14_09165 | Not Available | Negative | 1757792 - 1758349 | 19787.7 |
| vut family protein | CCZ14_09170 | Not Available | Negative | 1758422 - 1759087 | 25285.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





