Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | CCZ14_08505 | Not Available | Positive | 1610617 - 1611513 | 34119.3 |
| thiol:disulfide interchange protein dsbc | CCZ14_08510 | Not Available | Positive | 1611538 - 1612248 | 25637.1 |
| single-stranded-dna-specific exonuclease recj | CCZ14_08515 | Not Available | Positive | 1612254 - 1613987 | 63362.6 |
| lysine--trna ligase | CCZ14_08525 | Not Available | Positive | 1615186 - 1616703 | 57606.8 |
| isopentenyl-diphosphate delta-isomerase | CCZ14_08530 | Not Available | Negative | 1616746 - 1617294 | 20482.4 |
| hypothetical protein | CCZ14_08535 | Not Available | Negative | 1617417 - 1617542 | 4757.28 |
| purine permease | CCZ14_08540 | Not Available | Negative | 1617544 - 1618992 | 51752.4 |
| hypothetical protein | CCZ14_08545 | Not Available | Negative | 1618937 - 1619125 | 7277.7 |
| oxidoreductase (fe-s)-binding subunit | CCZ14_08550 | Not Available | Positive | 1619428 - 1621347 | 69061.8 |
| effector protein | CCZ14_08555 | Not Available | Positive | 1621347 - 1621835 | 17528.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





