Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional isocitrate dehydrogenase kinase/phosphatase | CCZ14_08035 | Not Available | Negative | 1529568 - 1531292 | 67107.7 |
| isocitrate lyase | CCZ14_08040 | Not Available | Negative | 1531417 - 1532721 | 47524.1 |
| malate synthase a | CCZ14_08045 | Not Available | Negative | 1532751 - 1534352 | 60364.1 |
| homoserine o-succinyltransferase | CCZ14_08050 | Not Available | Negative | 1534621 - 1535550 | 35786.3 |
| acetyltransferase | CCZ14_08055 | Not Available | Positive | 1535707 - 1536150 | 16472.8 |
| hypothetical protein | CCZ14_08060 | Not Available | Negative | 1536214 - 1536597 | 14509.8 |
| Trna-phe | Not Available | Not Available | Positive | 1537082 - 1537157 | Not Available |
| hypothetical protein | CCZ14_08075 | Not Available | Negative | 1537263 - 1537970 | 24645.5 |
| hypothetical protein | CCZ14_08080 | Not Available | Positive | 1538085 - 1538282 | 7312.93 |
| ornithine decarboxylase | CCZ14_08085 | Not Available | Positive | 1538363 - 1540498 | 79479.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





