Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii ubiquinol oxidase subunit 2 | CCZ14_07035 | Not Available | Positive | 1331474 - 1332610 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | CCZ14_07040 | Not Available | Positive | 1332623 - 1332715 | 3597.68 |
| phytase appa | CCZ14_07045 | Not Available | Positive | 1332795 - 1334105 | 47578.1 |
| cold-shock protein csph | CCZ14_07050 | Not Available | Negative | 1334093 - 1334305 | 7720.48 |
| cold-shock protein cspg | CCZ14_07055 | Not Available | Positive | 1334591 - 1334803 | 7781.14 |
| cold-shock protein | CCZ14_07060 | Not Available | Positive | 1334814 - 1335002 | 7104.55 |
| cold-shock protein | CCZ14_07065 | Not Available | Positive | 1334977 - 1335207 | 8727.65 |
| protein gnsa | CCZ14_07070 | Not Available | Positive | 1335197 - 1335370 | 6575.99 |
| electron transporter yccm | CCZ14_07075 | Not Available | Negative | 1335419 - 1336492 | 40076.3 |
| tmao reductase system periplasmic protein tort | CCZ14_07085 | Not Available | Positive | 1339390 - 1340418 | 37910.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





