Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | CCZ14_04710 | Not Available | Negative | 908011 - 909132 | 41366.7 |
| hydrogenase assembly protein hypc | CCZ14_04715 | Not Available | Negative | 909132 - 909404 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein hypb | CCZ14_04720 | Not Available | Negative | 909395 - 910267 | 31566.8 |
| protein hypa | CCZ14_04725 | Not Available | Negative | 910271 - 910621 | 13168.9 |
| transcriptional regulator | CCZ14_04730 | Not Available | Positive | 910833 - 911294 | 17656.0 |
| hypothetical protein | CCZ14_04735 | Not Available | Negative | 911210 - 911518 | 11355.7 |
| formate hydrogenlyase | CCZ14_04740 | Not Available | Positive | 911419 - 912030 | 21906.4 |
| formate hydrogenlyase subunit 3 | CCZ14_04745 | Not Available | Positive | 912027 - 913853 | 64129.2 |
| hydrogenase 3 membrane subunit | CCZ14_04750 | Not Available | Positive | 913856 - 914779 | 33059.4 |
| formate hydrogenlyase subunit 5 | CCZ14_04755 | Not Available | Positive | 914797 - 916506 | 64970.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





