Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1608190062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1294678 bp
Thymine Count
1295793 bp
Guanine Count
1342459 bp
Cytosine Count
1321524 bp
Genome Length
5254454 bp
Protein-coding Genes
4914 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sulfur acceptor subunit csde | CCZ14_04300 | Not Available | Negative | 818429 - 818872 | 15925.2 |
| cysteine desulfurase csda | CCZ14_04305 | Not Available | Negative | 818872 - 820077 | 43307.6 |
| ygdi/ygdr family lipoprotein | CCZ14_04310 | Not Available | Positive | 820269 - 820496 | 8174.67 |
| transcriptional regulator gcva | CCZ14_04315 | Not Available | Positive | 820847 - 821764 | 34389.4 |
| hypothetical protein | CCZ14_04320 | Not Available | Positive | 821783 - 822178 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | CCZ14_04325 | Not Available | Positive | 822171 - 823271 | 41907.5 |
| l-fucose operon activator | CCZ14_04330 | Not Available | Negative | 823315 - 824046 | 27363.7 |
| l-fucose mutarotase | CCZ14_04335 | Not Available | Negative | 824104 - 824526 | 15474.0 |
| l-fuculokinase | CCZ14_04340 | Not Available | Negative | 824528 - 825946 | 52307.7 |
| l-fucose isomerase | CCZ14_04345 | Not Available | Negative | 826055 - 827830 | 64993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





