Prevotella nigrescens strain KCOM 1102 KB5_8

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella nigrescens strain KCOM 1102 KB5_8 is a Gram-negative bacterium characterized as an anaerobe, meaning it thrives in environments devoid of oxygen. This strain possesses flagella, which may facilitate its motility in anaerobic conditions. The organism is defined by having a single replicon, indicating a streamlined genomic structure that can be associated with efficient replication processes. The accession number for Prevotella nigrescens strain KCOM 1102 KB5_8 is NHRW00000000.1, which serves as a reference for researchers seeking to access genetic and genomic information related to this specific strain. In terms of its biological or ecological role, the presence of Prevotella species, including P. nigrescens, is often linked to the human microbiome, particularly in the oral cavity and gastrointestinal tract. These bacteria can contribute to the complex microbial ecosystems that play crucial roles in digestion and maintaining health. The anaerobic nature of P. nigrescens suggests its adaptation to environments where oxygen levels are low, such as within biofilms or within gut flora. Understanding the characteristics of strains like KCOM 1102 KB5_8 can provide insights into their functions and interactions within these microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella nigrescens
Strainstrain KCOM 1102 KB5_8

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatroot canal
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella nigrescens strain KCOM 1102 KB5_8, whole genome shotgun

Gene Summary

Adenine Count

813364 bp

Thymine Count

814954 bp

Guanine Count

600358 bp

Cytosine Count

603153 bp

Genome Length

2837965 bp

Protein-coding Genes

2291 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphohydrolaseCBG57_03425Not AvailableNegative744882 - 74610246720.8
orotidine-5'-phosphate decarboxylaseCBG57_03430Not AvailableNegative746122 - 74694931002.3
peptide chain release factor 1CBG57_03435Not AvailableNegative747195 - 74830741875.4
phosphoribosylformylglycinamidine cyclo-ligaseCBG57_03440Not AvailableNegative748328 - 74949142626.1
shikimate dehydrogenaseCBG57_03445Not AvailableNegative749513 - 75026528258.1
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseCBG57_03450Not AvailableNegative750279 - 75101327676.8
phosphoribosylaminoimidazolesuccinocarboxamide synthaseCBG57_03455Not AvailableNegative751060 - 75200736091.9
phosphate starvation-inducible protein phohCBG57_03460Not AvailableNegative752021 - 75298035619.8
glycosyl transferase family 2CBG57_03465Not AvailableNegative753728 - 75472038660.2
hypothetical proteinCBG57_03470Not AvailableNegative754707 - 75620355422.7

Displaying genes 661 – 670 of 2350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.