Prevotella nigrescens strain KCOM 1102 KB5_8

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella nigrescens strain KCOM 1102 KB5_8 is a Gram-negative bacterium characterized as an anaerobe, meaning it thrives in environments devoid of oxygen. This strain possesses flagella, which may facilitate its motility in anaerobic conditions. The organism is defined by having a single replicon, indicating a streamlined genomic structure that can be associated with efficient replication processes. The accession number for Prevotella nigrescens strain KCOM 1102 KB5_8 is NHRW00000000.1, which serves as a reference for researchers seeking to access genetic and genomic information related to this specific strain. In terms of its biological or ecological role, the presence of Prevotella species, including P. nigrescens, is often linked to the human microbiome, particularly in the oral cavity and gastrointestinal tract. These bacteria can contribute to the complex microbial ecosystems that play crucial roles in digestion and maintaining health. The anaerobic nature of P. nigrescens suggests its adaptation to environments where oxygen levels are low, such as within biofilms or within gut flora. Understanding the characteristics of strains like KCOM 1102 KB5_8 can provide insights into their functions and interactions within these microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella nigrescens
Strainstrain KCOM 1102 KB5_8

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatroot canal
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella nigrescens strain KCOM 1102 KB5_8, whole genome shotgun

Gene Summary

Adenine Count

813364 bp

Thymine Count

814954 bp

Guanine Count

600358 bp

Cytosine Count

603153 bp

Genome Length

2837965 bp

Protein-coding Genes

2291 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tmrna,resume consensus sequence (at 89): attaattggcgaaaacaaNot AvailableNot AvailablePositive473416 - 473814Not Available
peptidase m20CBG57_02185Not AvailableNegative473991 - 47535250508.3
hypothetical proteinCBG57_02190Not AvailableNegative475477 - 47655938878.4
hypothetical proteinCBG57_02195Not AvailablePositive477231 - 47851449236.0
hypothetical proteinCBG57_02200Not AvailablePositive478517 - 47920026371.4
transcription-repair coupling factorCBG57_02205Not AvailableNegative479255 - 482734131342.0
hypothetical proteinCBG57_02210Not AvailablePositive482915 - 4831488664.78
hypothetical proteinCBG57_02215Not AvailableNegative483202 - 4834629945.93
dna starvation/stationary phase protection proteinCBG57_02220Not AvailableNegative483600 - 48410919305.2
16s ribosomal rnaNot AvailableNot AvailablePositive484462 - 486001Not Available

Displaying genes 421 – 430 of 2350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.