Porphyromonas gingivalis strain KCOM 2797 JS2_44

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis strain KCOM 2797 JS2_44 is a Gram-negative, anaerobic bacterium characterized by its rod shape and absence of mobility, indicating a non-motile lifestyle. This strain is associated with a host environment, specifically found in humans (Homo sapiens) and domestic dogs (Canis lupus familiaris). It exhibits mesophilic growth, with an optimal temperature of 37°C, which aligns with the body temperature of its hosts. Notably, Porphyromonas gingivalis is implicated in various oral health issues, including periodontitis and dysbiosis, affecting both human and canine populations. Its pathogenicity in humans is particularly concerning, as it is linked to chronic periodontitis and other periodontal diseases, which can have broader health implications, including potential associations with colorectal cancer (CRC). The bacterium's ability to thrive in anaerobic conditions allows it to flourish in the subgingival space of the oral cavity, a niche often deprived of oxygen. This strain features a single replicon and possesses two membranes, typical of Gram-negative bacteria, which may contribute to its survival and pathogenicity in host environments. The absence of sporulation suggests that it relies on other mechanisms for persistence and transmission within its ecological niche. In summary, Porphyromonas gingivalis strain KCOM 2797 JS2_44 exemplifies the complex interactions between oral microbiota and host health, highlighting the importance of understanding such bacteria in the context of periodontal diseases and their broader implications in systemic health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
Strainstrain KCOM 2797 JS2_44

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis strain KCOM 2797 JS2_44
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Canis lupus familiaris
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Porphyromonas gingivalis strain KCOM 2797 JS2_44, whole genome

Gene Summary

Adenine Count

617561 bp

Thymine Count

609920 bp

Guanine Count

575025 bp

Cytosine Count

575050 bp

Genome Length

2394377 bp

Protein-coding Genes

1988 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyrophosphataseCBG53_04240Not AvailableNegative924809 - 92515913348.8
d-tyrosyl-trna(tyr) deacylaseCBG53_04245Not AvailableNegative925164 - 92561616271.7
excinuclease abc subunit cCBG53_04250Not AvailableNegative925623 - 92742569924.7
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgCBG53_04255Not AvailableNegative927456 - 92933369951.4
hypothetical proteinCBG53_04260Not AvailablePositive929594 - 9297676786.22
hypothetical proteinCBG53_04265Not AvailablePositive930073 - 93165662073.9
hypothetical proteinCBG53_04270Not AvailablePositive931658 - 9319009469.61
hypothetical proteinCBG53_04275Not AvailablePositive931916 - 93336456222.9
type iii-b crispr-associated protein cas10/cmr2CBG53_04280Not AvailablePositive933357 - 93500363672.5
type iii-b crispr module-associated protein cmr3CBG53_04285Not AvailablePositive935005 - 93619846149.0

Displaying genes 811 – 820 of 2040 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PeriodontitisCausesPMC10258268
DysbiosisCausesPMC10258268
Periodontal diseaseCausesPMC1887533
Periodontal diseaseCausesPMC3505701
Chronic periodontitisCausesPMC3505701
Periodontal diseasesCausesPMC3617233
Chronic periodontitisCausesPMC6060398
Human pdCausesPMC10797024
PeriodontitisCausesPMC10797024
PeriodontitisCausesPMC11121222

Displaying health effects 1 – 10 of 19 in total