Eikenella corrodens strain KCOM 1378 B230_1_6

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens strain KCOM 1378 B230_1_6 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape. This strain is primarily found in various habitats within the human body, including the gastrointestinal tract, genital tracts, oral cavity, oropharyngeal regions, upper respiratory tract, and urogenital tract. Eikenella corrodens is known to be associated with several health effects, particularly in individuals with compromised health. It can lead to serious conditions such as endocarditis, liver abscesses, epidural abscesses, and periodontitis-like diseases. Other notable infections include various types of abscesses—vulvar, lung, and visceral—which highlight its pathogenic potential when it translocates from its native habitats. The strain has been cataloged with accession number NHRS00000000.1, indicating its recognized status in microbial databases. Eikenella corrodens, while part of the normal flora, can become opportunistic, illustrating the complex relationship between commensal organisms and host health. The presence of Eikenella corrodens in diverse human habitats and its ability to cause significant health issues underscores its ecological role as both a commensal and a potential pathogen. This duality emphasizes the importance of understanding microbial dynamics in human health, particularly concerning infections that may arise from the disruption of normal flora or when host defenses are compromised.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
Strainstrain KCOM 1378 B230_1_6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Eikenella corrodens strain KCOM 1378 B230_1_6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal; genital tracts; intestinal; oral cavity; oropharyngeal; oropharynx; respiratory; upper respiratory tract; urogenital tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens strain KCOM 1378 B230_1_6, whole genome

Gene Summary

Adenine Count

494730 bp

Thymine Count

493203 bp

Guanine Count

621501 bp

Cytosine Count

617526 bp

Genome Length

2227855 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase recaCA838_06655Not AvailablePositive1323102 - 13233448616.41
hypothetical proteinCA838_06660Not AvailablePositive1323469 - 132395417858.6
iron-sulfur cluster assembly protein iscaCA838_06665Not AvailablePositive1324028 - 132434811538.7
23s rrna methyltransferaseCA838_06670Not AvailablePositive1324451 - 132507122778.4
cell division protein ftshCA838_06675Not AvailablePositive1325139 - 132717575025.3
cation-binding proteinCA838_06685Not AvailableNegative1327760 - 132826319143.7
bacterioferritinCA838_06690Not AvailableNegative1328363 - 13285636815.07
signal peptidase iiCA838_06695Not AvailablePositive1328814 - 132932018879.0
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCA838_06700Not AvailablePositive1329371 - 133030333807.4
hypothetical proteinCA838_06705Not AvailableNegative1330563 - 133110818714.6

Displaying genes 1311 – 1320 of 2182 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Epidural abscessCausesPMC12375837
Abscess lesionsCausesPMC12375837
Vulvar abscessCausesPMC1791056
Periodontitis-like diseaseCausesPMC422167
Visceral abscessesCausesPMC5767030
Liver abscessesCausesPMC5767030
EndocarditisCausesPMC5767030
Liver abscessCausesPMC5767030
Lung abscessCausesPMC7236361
Infective endocarditisCausesPMC7236361

Displaying health effects 1 – 10 of 11 in total