Halorubrum sp. Hd13

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. Hd13 is a rod-shaped microorganism characterized by the presence of flagella, which likely contributes to its motility in various environments. This species, belonging to the family Halorubraceae, is notable for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The reference accession number for Halorubrum sp. Hd13 is NHOY00000000.1, which provides a genetic basis for further studies and comparisons with other halophilic microorganisms. As a member of the Halorubrum genus, this organism thrives in high-salinity environments, which is a typical characteristic of many extremophiles. The presence of flagella suggests that Halorubrum sp. Hd13 may exhibit active movement in its saline habitat, potentially enabling it to navigate towards nutrient sources or optimal conditions for growth. The ecological role of such halophilic microorganisms is significant, as they contribute to biogeochemical cycles in saline environments and can impact the microbial diversity and stability of these ecosystems. In summary, Halorubrum sp. Hd13's rod shape and flagella presence, along with its single replicon and genetic data, underscore its adaptations to extreme saline environments and highlight its role in microbial ecology and evolution in such habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. Hd13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. Hd13 contig0124, whole genome shotgun sequence.

Gene Summary

Adenine Count

619928 bp

Thymine Count

614038 bp

Guanine Count

1289934 bp

Cytosine Count

1287109 bp

Genome Length

3811317 bp

Protein-coding Genes

3538 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalamin-binding proteinDJ81_15150Not AvailablePositive3131980 - 313276227215.4
hypothetical proteinDJ81_15155Not AvailablePositive3132826 - 313338018458.6
hypothetical proteinDJ81_15160Not AvailablePositive3133540 - 31337949069.63
marr family transcriptional regulatorDJ81_15165Not AvailableNegative3133868 - 313447621849.3
transposaseDJ81_15170Not AvailablePositive3134754 - 313599847509.9
phosphoesteraseDJ81_15175Not AvailableNegative3136131 - 313726742174.7
polyketide cyclaseDJ81_15180Not AvailableNegative3137354 - 313779416200.9
bacterio-opsin activatorDJ81_15185Not AvailableNegative3137810 - 313981372125.5
beta-carotene 15,15'-dioxygenaseDJ81_15190Not AvailablePositive3139933 - 314097636505.0
cdp-diacylglycerol--serine o-phosphatidyltransferaseDJ81_15195Not AvailablePositive3141079 - 314183125364.7

Displaying genes 2941 – 2950 of 3587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.