Halorubrum sp. Hd13

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. Hd13 is a rod-shaped microorganism characterized by the presence of flagella, which likely contributes to its motility in various environments. This species, belonging to the family Halorubraceae, is notable for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The reference accession number for Halorubrum sp. Hd13 is NHOY00000000.1, which provides a genetic basis for further studies and comparisons with other halophilic microorganisms. As a member of the Halorubrum genus, this organism thrives in high-salinity environments, which is a typical characteristic of many extremophiles. The presence of flagella suggests that Halorubrum sp. Hd13 may exhibit active movement in its saline habitat, potentially enabling it to navigate towards nutrient sources or optimal conditions for growth. The ecological role of such halophilic microorganisms is significant, as they contribute to biogeochemical cycles in saline environments and can impact the microbial diversity and stability of these ecosystems. In summary, Halorubrum sp. Hd13's rod shape and flagella presence, along with its single replicon and genetic data, underscore its adaptations to extreme saline environments and highlight its role in microbial ecology and evolution in such habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. Hd13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. Hd13 contig0124, whole genome shotgun sequence.

Gene Summary

Adenine Count

619928 bp

Thymine Count

614038 bp

Guanine Count

1289934 bp

Cytosine Count

1287109 bp

Genome Length

3811317 bp

Protein-coding Genes

3538 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDJ81_10620Not AvailableNegative2240432 - 22406839760.54
utp--glucose-1-phosphate uridylyltransferaseDJ81_10625Not AvailablePositive2240943 - 224170728523.2
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferaseDJ81_10630Not AvailableNegative2241890 - 224329351657.7
hypothetical proteinDJ81_10635Not AvailablePositive2244252 - 224576352103.0
is1595 family transposaseDJ81_10645Not AvailableNegative2246342 - 224727135868.5
hypothetical proteinDJ81_10655Not AvailablePositive2249164 - 224990427322.2
glutamine--fructose-6-phosphate transaminase (isomerizing)DJ81_10660Not AvailableNegative2249978 - 225183765383.2
glucose-1-phosphate thymidylyltransferaseDJ81_10665Not AvailableNegative2251840 - 225301540548.6
glucose-1-phosphate thymidylyltransferaseDJ81_10675Not AvailableNegative2253559 - 225477042407.8
nucleoside-diphosphate sugar epimeraseDJ81_10680Not AvailablePositive2254937 - 225586334009.8

Displaying genes 2061 – 2070 of 3587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.