Halorubrum sp. Ib24

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. Ib24 is a rod-shaped microorganism that possesses flagella, indicating its capability for motility. This feature may play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, which is characteristic of certain archaeal species, suggesting a streamlined genetic organization. The accession number for Halorubrum sp. Ib24 is NHOX00000000.1, which serves as a reference for genetic and genomic studies related to this species. This identification allows researchers to access and analyze its genomic sequences, facilitating a better understanding of its biological functions and potential applications. Ecologically, Halorubrum sp. Ib24 may inhabit extreme environments, as is typical for many members of the Halorubrum genus, which are often found in hypersaline conditions. The presence of flagella could enhance its survival and adaptability in such challenging habitats by enabling the organism to move toward more favorable conditions or resources. In summary, Halorubrum sp. Ib24 is characterized as a rod-shaped, flagellated archaeon with a single replicon, and its motility may provide ecological advantages in extreme environments. Further research into its genomic data could reveal insights into its metabolic pathways and ecological roles within its habitat.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. Ib24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. Ib24 scaffold2, whole genome shotgun sequence.

Gene Summary

Adenine Count

480970 bp

Thymine Count

483629 bp

Guanine Count

1003273 bp

Cytosine Count

1002696 bp

Genome Length

2970568 bp

Protein-coding Genes

2609 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin reductaseDJ82_01935Not AvailablePositive410335 - 41140537866.5
hypothetical proteinDJ82_01940Not AvailablePositive411545 - 41210518669.4
threonine ammonia-lyaseDJ82_01945Not AvailableNegative412461 - 41367242670.4
gamma-glutamylcyclotransferaseDJ82_01950Not AvailableNegative413922 - 41434415218.8
hypothetical proteinDJ82_01955Not AvailablePositive414494 - 41600251237.0
heat-shock protein hsp20DJ82_01960Not AvailablePositive416104 - 41658317453.7
heat-shock protein hsp20DJ82_01965Not AvailablePositive416692 - 41714417118.5
protein-l-isoaspartate o-methyltransferaseDJ82_01970Not AvailablePositive417221 - 41791324601.9
protein-l-isoaspartate o-methyltransferaseDJ82_01975Not AvailablePositive417994 - 41876727791.2
ig domain-containing protein group 1 domain-containing proteinDJ82_01980Not AvailableNegative418801 - 41927716598.5

Displaying genes 351 – 360 of 2646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.