Halorubrum sp. Ib24

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. Ib24 is a rod-shaped microorganism that possesses flagella, indicating its capability for motility. This feature may play a crucial role in its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, which is characteristic of certain archaeal species, suggesting a streamlined genetic organization. The accession number for Halorubrum sp. Ib24 is NHOX00000000.1, which serves as a reference for genetic and genomic studies related to this species. This identification allows researchers to access and analyze its genomic sequences, facilitating a better understanding of its biological functions and potential applications. Ecologically, Halorubrum sp. Ib24 may inhabit extreme environments, as is typical for many members of the Halorubrum genus, which are often found in hypersaline conditions. The presence of flagella could enhance its survival and adaptability in such challenging habitats by enabling the organism to move toward more favorable conditions or resources. In summary, Halorubrum sp. Ib24 is characterized as a rod-shaped, flagellated archaeon with a single replicon, and its motility may provide ecological advantages in extreme environments. Further research into its genomic data could reveal insights into its metabolic pathways and ecological roles within its habitat.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. Ib24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. Ib24 scaffold2, whole genome shotgun sequence.

Gene Summary

Adenine Count

480970 bp

Thymine Count

483629 bp

Guanine Count

1003273 bp

Cytosine Count

1002696 bp

Genome Length

2970568 bp

Protein-coding Genes

2609 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferase type 11DJ82_13205Not AvailablePositive2752615 - 275324122749.4
3-hydroxyacyl-coa dehydrogenaseDJ82_13210Not AvailableNegative2753259 - 275525071227.9
3-methyladenine dna glycosylaseDJ82_13215Not AvailablePositive2755415 - 275601121780.5
30s ribosomal protein s6--l-glutamate ligaseDJ82_13220Not AvailableNegative2756358 - 275768647776.7
hypothetical proteinDJ82_13225Not AvailablePositive2757834 - 275910243975.6
deacylaseDJ82_13230Not AvailablePositive2759176 - 276023138035.7
hypothetical proteinDJ82_13235Not AvailableNegative2760302 - 276082017939.2
phospholipid-binding proteinDJ82_13240Not AvailablePositive2760958 - 276141316626.1
deoxyribonucleaseDJ82_13245Not AvailablePositive2761490 - 276235031000.3
male sterility domain-containing proteinDJ82_13250Not AvailablePositive2762347 - 276350741050.2

Displaying genes 2451 – 2460 of 2646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.