Paraburkholderia caledonica strain Bk sc_041

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caledonica strain Bk sc_041 is characterized as a rod-shaped bacterium possessing flagella, which suggests it is capable of motility. The presence of flagella typically indicates that the organism can navigate its environment, potentially enhancing its ability to colonize various niches and interact with other microorganisms. This strain has a single replicon, indicating a streamlined genetic organization that can be an advantage in specific ecological contexts, such as rapid adaptation to environmental changes. The genomic data for Paraburkholderia caledonica strain Bk sc_041 is cataloged under the accession NHOM00000000.1, providing a reference point for researchers interested in the genetic and functional characteristics of this organism. In ecological terms, members of the Paraburkholderia genus are often associated with diverse environments, including soil and plant rhizospheres, where they can play significant roles in nutrient cycling and plant health. The motility conferred by its flagella may facilitate interactions with plant roots or other microorganisms, potentially enhancing its ecological role. Understanding the specific traits of Paraburkholderia caledonica strain Bk sc_041 can provide insights into its potential applications in bioremediation or agriculture, as well as its contributions to microbial communities in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caledonica
Strainstrain Bk sc_041

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caledonica strain Bk sc_041, whole genome shotgun

Gene Summary

Adenine Count

1394987 bp

Thymine Count

1401119 bp

Guanine Count

2273005 bp

Cytosine Count

2267833 bp

Genome Length

7337283 bp

Protein-coding Genes

6410 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoacetone oxidase family fad-binding enzymeBWU74_28830Not AvailableNegative6449975 - 645119243869.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadBWU74_28835Not AvailablePositive6451305 - 645233336349.9
gtp cyclohydrolase i fole2BWU74_28840Not AvailableNegative6452422 - 645322829976.9
1-deoxy-d-xylulose-5-phosphate synthaseBWU74_28845Not AvailableNegative6453572 - 645547968183.3
geranyl transferaseBWU74_28850Not AvailableNegative6455565 - 645644630899.1
exodeoxyribonuclease vii small subunitBWU74_28855Not AvailableNegative6456443 - 645675110636.3
aromatic ring-hydroxylating dioxygenase subunit alphaBWU74_28860Not AvailablePositive6457039 - 645814542560.3
sulfurtransferaseBWU74_28865Not AvailablePositive6458306 - 645917530999.4
carboxymethylenebutenolidaseBWU74_28870Not AvailableNegative6459338 - 646021031654.7
fad-dependent oxidoreductaseBWU74_28875Not AvailableNegative6460299 - 646164548673.8

Displaying genes 5701 – 5710 of 6470 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.